Jmol で使われている色
元素の種類を表す色 ｜ アミノ酸の色 ｜ Shapely（均整配色）での色 ｜ タンパク質と核酸の構造に対する色
1. 元素の種類を表すのに使われている色
関連する命令: color [object] cpk , set defaultColors Jmol , set defaultColors Rasmol
周期律表
| H | He | ||||||||||||||||
| Li | Be | B | C | N | O | F | Ne | ||||||||||
| Na | Mg | Al | Si | P | S | Cl | Ar | ||||||||||
| K | Ca | Sc | Ti | V | Cr | Mn | Fe | Co | Ni | Cu | Zn | Ga | Ge | As | Se | Br | Kr |
| Rb | Sr | Y | Zr | Nb | Mo | Tc | Ru | Rh | Pd | Ag | Cd | In | Sn | Sb | Te | I | Xe |
| Cs | Ba | * | Hf | Ta | W | Re | Os | Ir | Pt | Au | Hg | Tl | Pb | Bi | Po | At | Rn |
| Fr | Ra | ** | Rf | Db | Sg | Bh | Hs | Mt | |||||||||
| * | La | Ce | Pr | Nd | Pm | Sm | Eu | Gd | Tb | Dy | Ho | Er | Tm | Yb | Lu | ||
| ** | Ac | Th | Pa | U | Np | Pu | Am | Cm | Bk | Cf | Es | Fm | Md | No | Lr | ||
原子番号順
| Jmol | Rasmol | Rasmol “CPKnew” |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 記号 | 10進 | 16進 | 16進 | 16進 | ||||||
| 1 | H | [255,255,255] | FFFFFF | FFFFFF | ||||||
| 2 | He | [217,255,255] | D9FFFF | FFC0CB | ||||||
| 3 | Li | [204,128,255] | CC80FF | B22222 | B22121 | |||||
| 4 | Be | [194,255,0] | C2FF00 | FF1493 | ||||||
| 5 | B | [255,181,181] | FFB5B5 | 00FF00 | ||||||
| 6 | C | [144,144,144] | 909090 | C8C8C8 | D3D3D3 | |||||
| 7 | N | [48,80,248] | 3050F8 | 8F8FFF | 87CEE6 | |||||
| 8 | O | [255,13,13] | FF0D0D | F00000 | FF0000 | |||||
| 9 | F | [144,224,80] | 90E050 | DAA520 | ||||||
| 10 | Ne | [179,227,245] | B3E3F5 | FF1493 | ||||||
| 11 | Na | [171,92,242] | AB5CF2 | 0000FF | ||||||
| 12 | Mg | [138,255,0] | 8AFF00 | 228B22 | ||||||
| 13 | Al | [191,166,166] | BFA6A6 | 808090 | 696969 | |||||
| 14 | Si | [240,200,160] | F0C8A0 | DAA520 | ||||||
| 15 | P | [255,128,0] | FF8000 | FFA500 | FFAA00 | |||||
| 16 | S | [255,255,48] | FFFF30 | FFC832 | FFFF00 | |||||
| 17 | Cl | [31,240,31] | 1FF01F | 00FF00 | ||||||
| 18 | Ar | [128,209,227] | 80D1E3 | FF1493 | ||||||
| 19 | K | [143,64,212] | 8F40D4 | FF1493 | ||||||
| 20 | Ca | [61,255,0] | 3DFF00 | 808090 | 696969 | |||||
| 21 | Sc | [230,230,230] | E6E6E6 | FF1493 | ||||||
| 22 | Ti | [191,194,199] | BFC2C7 | 808090 | 696969 | |||||
| 23 | V | [166,166,171] | A6A6AB | FF1493 | ||||||
| 24 | Cr | [138,153,199] | 8A99C7 | 808090 | 696969 | |||||
| 25 | Mn | [156,122,199] | 9C7AC7 | 808090 | 696969 | |||||
| 26 | Fe | [224,102,51] | E06633 | FFA500 | FFAA00 | |||||
| 27 | Co | [240,144,160] | F090A0 | FF1493 | ||||||
| 28 | Ni | [80,208,80] | 50D050 | A52A2A | 802828 | |||||
| 29 | Cu | [200,128,51] | C88033 | A52A2A | 802828 | |||||
| 30 | Zn | [125,128,176] | 7D80B0 | A52A2A | 802828 | |||||
| 31 | Ga | [194,143,143] | C28F8F | FF1493 | ||||||
| 32 | Ge | [102,143,143] | 668F8F | FF1493 | ||||||
| 33 | As | [189,128,227] | BD80E3 | FF1493 | ||||||
| 34 | Se | [255,161,0] | FFA100 | FF1493 | ||||||
| 35 | Br | [166,41,41] | A62929 | A52A2A | 802828 | |||||
| 36 | Kr | [92,184,209] | 5CB8D1 | FF1493 | ||||||
| 37 | Rb | [112,46,176] | 702EB0 | FF1493 | ||||||
| 38 | Sr | [0,255,0] | 00FF00 | FF1493 | ||||||
| 39 | Y | [148,255,255] | 94FFFF | FF1493 | ||||||
| 40 | Zr | [148,224,224] | 94E0E0 | FF1493 | ||||||
| 41 | Nb | [115,194,201] | 73C2C9 | FF1493 | ||||||
| 42 | Mo | [84,181,181] | 54B5B5 | FF1493 | ||||||
| 43 | Tc | [59,158,158] | 3B9E9E | FF1493 | ||||||
| 44 | Ru | [36,143,143] | 248F8F | FF1493 | ||||||
| 45 | Rh | [10,125,140] | 0A7D8C | FF1493 | ||||||
| 46 | Pd | [0,105,133] | 006985 | FF1493 | ||||||
| 47 | Ag | [192,192,192] | C0C0C0 | 808090 | 696969 | |||||
| 48 | Cd | [255,217,143] | FFD98F | FF1493 | ||||||
| 49 | In | [166,117,115] | A67573 | FF1493 | ||||||
| 50 | Sn | [102,128,128] | 668080 | FF1493 | ||||||
| 51 | Sb | [158,99,181] | 9E63B5 | FF1493 | ||||||
| 52 | Te | [212,122,0] | D47A00 | FF1493 | ||||||
| 53 | I | [148,0,148] | 940094 | A020F0 | ||||||
| 54 | Xe | [66,158,176] | 429EB0 | FF1493 | ||||||
| 55 | Cs | [87,23,143] | 57178F | FF1493 | ||||||
| 56 | Ba | [0,201,0] | 00C900 | FFA500 | FFAA00 | |||||
| 57 | La | [112,212,255] | 70D4FF | FF1493 | ||||||
| 58 | Ce | [255,255,199] | FFFFC7 | FF1493 | ||||||
| 59 | Pr | [217,255,199] | D9FFC7 | FF1493 | ||||||
| 60 | Nd | [199,255,199] | C7FFC7 | FF1493 | ||||||
| 61 | Pm | [163,255,199] | A3FFC7 | FF1493 | ||||||
| 62 | Sm | [143,255,199] | 8FFFC7 | FF1493 | ||||||
| 63 | Eu | [97,255,199] | 61FFC7 | FF1493 | ||||||
| 64 | Gd | [69,255,199] | 45FFC7 | FF1493 | ||||||
| 65 | Tb | [48,255,199] | 30FFC7 | FF1493 | ||||||
| 66 | Dy | [31,255,199] | 1FFFC7 | FF1493 | ||||||
| 67 | Ho | [0,255,156] | 00FF9C | FF1493 | ||||||
| 68 | Er | [0,230,117] | 00E675 | FF1493 | ||||||
| 69 | Tm | [0,212,82] | 00D452 | FF1493 | ||||||
| 70 | Yb | [0,191,56] | 00BF38 | FF1493 | ||||||
| 71 | Lu | [0,171,36] | 00AB24 | FF1493 | ||||||
| 72 | Hf | [77,194,255] | 4DC2FF | FF1493 | ||||||
| 73 | Ta | [77,166,255] | 4DA6FF | FF1493 | ||||||
| 74 | W | [33,148,214] | 2194D6 | FF1493 | ||||||
| 75 | Re | [38,125,171] | 267DAB | FF1493 | ||||||
| 76 | Os | [38,102,150] | 266696 | FF1493 | ||||||
| 77 | Ir | [23,84,135] | 175487 | FF1493 | ||||||
| 78 | Pt | [208,208,224] | D0D0E0 | FF1493 | ||||||
| 79 | Au | [255,209,35] | FFD123 | DAA520 | ||||||
| 80 | Hg | [184,184,208] | B8B8D0 | FF1493 | ||||||
| 81 | Tl | [166,84,77] | A6544D | FF1493 | ||||||
| 82 | Pb | [87,89,97] | 575961 | FF1493 | ||||||
| 83 | Bi | [158,79,181] | 9E4FB5 | FF1493 | ||||||
| 84 | Po | [171,92,0] | AB5C00 | FF1493 | ||||||
| 85 | At | [117,79,69] | 754F45 | FF1493 | ||||||
| 86 | Rn | [66,130,150] | 428296 | FF1493 | ||||||
| 87 | Fr | [66,0,102] | 420066 | FF1493 | ||||||
| 88 | Ra | [0,125,0] | 007D00 | FF1493 | ||||||
| 89 | Ac | [112,171,250] | 70ABFA | FF1493 | ||||||
| 90 | Th | [0,186,255] | 00BAFF | FF1493 | ||||||
| 91 | Pa | [0,161,255] | 00A1FF | FF1493 | ||||||
| 92 | U | [0,143,255] | 008FFF | FF1493 | ||||||
| 93 | Np | [0,128,255] | 0080FF | FF1493 | ||||||
| 94 | Pu | [0,107,255] | 006BFF | FF1493 | ||||||
| 95 | Am | [84,92,242] | 545CF2 | FF1493 | ||||||
| 96 | Cm | [120,92,227] | 785CE3 | FF1493 | ||||||
| 97 | Bk | [138,79,227] | 8A4FE3 | FF1493 | ||||||
| 98 | Cf | [161,54,212] | A136D4 | FF1493 | ||||||
| 99 | Es | [179,31,212] | B31FD4 | FF1493 | ||||||
| 100 | Fm | [179,31,186] | B31FBA | FF1493 | ||||||
| 101 | Md | [179,13,166] | B30DA6 | FF1493 | ||||||
| 102 | No | [189,13,135] | BD0D87 | FF1493 | ||||||
| 103 | Lr | [199,0,102] | C70066 | FF1493 | ||||||
| 104 | Rf | [204,0,89] | CC0059 | FF1493 | ||||||
| 105 | Db | [209,0,79] | D1004F | FF1493 | ||||||
| 106 | Sg | [217,0,69] | D90045 | FF1493 | ||||||
| 107 | Bh | [224,0,56] | E00038 | FF1493 | ||||||
| 108 | Hs | [230,0,46] | E6002E | FF1493 | ||||||
| 109 | Mt | [235,0,38] | EB0026 | FF1493 | ||||||
2. タンパク質のアミノ酸の色の設定
関連する命令: color [object] amino, color [object] shapely
タンパク質のアミノ酸ごとの色の設定
| アミノ酸 | 記号 |
RGB | Color |
|---|---|---|---|
| アラニン | Ala |
#C8C8C8 | |
| アルギニン | Arg |
#145AFF | |
| アスパラギン | Asn |
#00DCDC | |
| アスパラギン酸 | Asp |
#E60A0A | |
| システイン | Cys |
#E6E600 | |
| グルタミン | Gln |
#00DCDC | |
| グルタミン酸 | Glu |
#E60A0A | |
| グリシン | Gly |
#EBEBEB | |
| ヒスチジン | His |
#8282D2 | |
| イソロイシン | Ile |
#0F820F | |
| ロイシン | Leu |
#0F820F | |
| リシン | Lys |
#145AFF | |
| メチオニン | Met |
#E6E600 | |
| フェニルアラニン | Phe |
#3232AA | |
| プロリン | Pro |
#DC9682 | |
| セリン | Ser |
#FA9600 | |
| チロシン | Thr |
#FA9600 | |
| トリプトファン | Trp |
#B45AB4 | |
| チロシン | Tyr |
#3232AA | |
| バリン | Val |
#0F820F | |
| アスパラギン酸またはアスパラギン | Asx |
#FF69B4 | |
| グルタミン酸またはグルタミン | Glx |
#FF69B4 | |
| その他 | Other |
#BEA06E |
Shapely（均整配色）におけるタンパク質のアミノ酸および核酸の色の設定
| アミノ酸 | 記号 |
RGB | Color |
|---|---|---|---|
| アラニン | Ala |
#8CFF8C | |
| アルギニン | Arg |
#00007C | |
| アスパラギン | Asn |
#FF7C70 | |
| アスパラギン酸 | Asp |
#A00042 | |
| システイン | Cys |
#FFFF70 | |
| グルタミン | Gln |
#FF4C4C | |
| グルタミン酸 | Glu |
#660000 | |
| グリシン | Gly |
#FFFFFF | |
| ヒスチジン | His |
#7070FF | |
| イソロイシン | Ile |
#004C00 | |
| ロイシン | Leu |
#455E45 | |
| リシン | Lys |
#4747B8 | |
| メチオニン | Met |
#B8A042 | |
| フェニルアラニン | Phe |
#534C52 | |
| プロリン | Pro |
#525252 | |
| セリン | Ser |
#FF7042 | |
| チロシン | Thr |
#B84C00 | |
| トリプトファン | Trp |
#4F4600 | |
| チロシン | Tyr |
#8C704C | |
| バリン | Val |
#FF8CFF | |
| アスパラギン酸またはアスパラギン | Asx |
#FF00FF | |
| グルタミン酸またはグルタミン | Glx |
#FF00FF | |
| その他 | Other |
#FF00FF |
| 核 酸 | 記号 |
RGB | Color |
|---|---|---|---|
| アデニン | A |
#A0A0FF | |
| グアニン | G |
#FF7070 | |
I |
#80FFFF | ||
| シトシン | C |
#FF8C4B | |
| チミン | T |
#A0FFA0 | |
| ウラシル | U |
#FF8080 |
3. タンパク質と核酸などの二次構造に対する色の設定
関連する命令: color [object] chain
タンパク質
| 構 造 | 記号 | RGB(10進) | RGB(Hex) | Color |
|---|---|---|---|---|
| α helix | αヘリックス | [255,0,128] | #FF0080 | |
| 310 helix | 310 ヘリックス | [160,0,128] | #A00080 | |
| π helix | π ヘリックス | [96,0,128]< | #600080 | |
| β strand | βストランド | [96,0,128]< | #FFC800 | |
| (β) turn | (β) ターン | [96,128,255] | #6080FF | |
| other | その他 | [255,255,255] | #FFFFFF |
核酸
| 構 造 | 記号 | RGB(10進) | RGB(Hex) | Color |
|---|---|---|---|---|
| DNA | デオキシリボ核酸 | [174,0,254] | #AE00FE | |
| RNA | リボ核酸 | [253,1,98] | #FD0162 |
その他
| 構 造 | 記号 | RGB(10進) | RGB(Hex) | Color |
|---|---|---|---|---|
| carbohydrate | 糖類 | [166,166,250] | #A6A6FA | |
| other | その他 | [128,128,128] | #808080 |
4. 電荷
形式電荷
関連する命令: color [object] formalCharge
| 電荷 | RGB(10進) | RGB(Hex) | Color |
|---|---|---|---|
| -4 | [255,0,0] | FF0000 | |
| -3 | [255,64,64] | FF4040 | |
| -2 | [255,128,128] | FF8080 | |
| -1 | [255,192,192] | FFC0C0 | |
| 0 | [255,255,255] | FFFFFF | |
| 1 | [216,216,255] | D8D8FF | |
| 2 | [180,180,255] | B4B4FF | |
| 3 | [144,144,255] | 9090FF | |
| 4 | [108,108,255] | 6C6CFF | |
| 5 | [72,72,255] | 4848FF | |
| 6 | [36,36,255] | 2424FF | |
| 7 | [0,0,255] | 0000FF |
部分電荷
関連する命令: color [object] partialCharge
| 負の電荷 | 正の電荷 | |||||||||||||||||||||||||||||||
値の範囲は電荷の最小値と最大値に合わせて調整されます。
5. Jmolで使用できる色名
通常のWebブラウザがサポートしている色名をアルファベット順に並べたものです
| 色名 | RGB | 色見本 | |
|---|---|---|---|
| AliceBlue | #F0F8FF | ||
| AntiqueWhite | #FAEBD7 | ||
| Aqua | #00FFFF | ||
| Aquamarine | #7FFFD4 | ||
| Azure | #F0FFFF | ||
| Beige | #F5F5DC | ||
| Bisque | #FFE4C4 | ||
| Black | #000000 | ||
| BlanchedAlmond | #FFEBCD | ||
| Blue | #0000FF | ||
| BlueTint | #AFD7FF | ||
| BlueViolet | #8A2BE2 | ||
| Brown | #A52A2A | ||
| Burlywood | #DEB887 | ||
| CadetBlue | #5F9EA0 | ||
| Chartreuse | #7FFF00 | ||
| Chocolate | #D2691E | ||
| Coral | #FF7F50 | ||
| CornFlowerBlue | #6495ED | ||
| Cornsilk | #FFF8DC | ||
| Crimson | #DC143C | ||
| Cyan | #00FFFF | ||
| DarkBlue | #00008B | ||
| DarkCyan | #008B8B | ||
| DarkGoldenrod | #B8860B | ||
| DarkGray | #A9A9A9 | ||
| DarkGreen | #006400 | ||
| DarkKhaki | #BDB76B | ||
| DarkMagenta | #8B008B | ||
| DarkOliveGreen | #556B2F | ||
| DarkOrange | #FF8C00 | ||
| DarkOrchid | #9932CC | ||
| DarkRed | #8B0000 | ||
| DarkSalmon | #E9967A | ||
| DarkSeaGreen | #8FBC8F | ||
| DarkSlateBlue | #483D8B | ||
| DarkSlateGray | #2F4F4F | ||
| DarkTurquoise | #00CED1 | ||
| DarkViolet | #9400D3 | ||
| DeepPink | #FF1493 | ||
| DeepSkyBlue | #00BFFF | ||
| DimGray | #696969 | ||
| DodgerBlue | #1E90FF | ||
| Firebrick | #B22222 | ||
| FloralWhite | #FFFAF0 | ||
| ForestGreen | #228B22 | ||
| Fuchsia | #FF00FF | ||
| Gainsboro | #DCDCDC | ||
| GhostWhite | #F8F8FF | ||
| Gold | #FFD700 | ||
| Goldenrod | #DAA520 | ||
| Gray | #808080 | ||
| Green | #008000 | ||
| GreenBlue | #2E8B57 | ||
| GreenTint | #98FFB3 | ||
| GreenYellow | #ADFF2F | ||
| Grey | #808080 | ||
| Honeydew | #F0FFF0 | ||
| HotPink | #FF69B4 | ||
| IndianRed | #CD5C5C | ||
| Indigo | #4B0082 | ||
| Ivory | #FFFFF0 | ||
| Khaki | #F0E68C | ||
| Lavender | #E6E6FA | ||
| LavenderBlush | #FFF0F5 | ||
| LawnGreen | #7CFC00 | ||
| LemonChiffon | #FFFACD | ||
| LightBlue | #ADD8E6 | ||
| LightCoral | #F08080 | ||
| LightCyan | #E0FFFF | ||
| LightGoldenrodYellow | #FAFAD2 | ||
| LightGreen | #90EE90 | ||
| LightGrey | #D3D3D3 | ||
| LightPink | #FFB6C1 | ||
| LightSalmon | #FFA07A | ||
| LightSeaGreen | #20B2AA | ||
| LightSkyBlue | #87CEFA | ||
| LightSlateGray | #778899 | ||
| LightSteelBlue | #B0C4DE | ||
| LightYellow | #FFFFE0 | ||
| Lime | #00FF00 | ||
| LimeGreen | #32CD32 | ||
| Linen | #FAF0E6 | ||
| Magenta | #FF00FF | ||
| Maroon | #800000 | ||
| MediumAquamarine | #66CDAA | ||
| MediumBlue | #0000CD | ||
| MediumOrchid | #BA55D3 | ||
| MediumPurple | #9370DB | ||
| MediumSeaGreen | #3CB371 | ||
| MediumSlateBlue | #7B68EE | ||
| MediumSpringGreen | #00FA9A | ||
| MediumTurquoise | #48D1CC | ||
| MediumVioletRed | #C71585 | ||
| MidnightBlue | #191970 | ||
| MintCream | #F5FFFA | ||
| MistyRose | #FFE4E1 | ||
| Moccasin | #FFE4B5 | ||
| NavajoWhite | #FFDEAD | ||
| Navy | #000080 | ||
| OldLace | #FDF5E6 | ||
| Olive | #808000 | ||
| OliveDrab | #6B8E23 | ||
| Orange | #FFA500 | ||
| OrangeRed | #FF4500 | ||
| Orchid | #DA70D6 | ||
| PaleGoldenrod | #EEE8AA | ||
| PaleGreen | #98FB98 | ||
| PaleTurquoise | #AFEEEE | ||
| PaleVioletRed | #DB7093 | ||
| PapayaWhip | #FFEFD5 | ||
| PeachPuff | #FFDAB9 | ||
| Peru | #CD853F | ||
| Pink | #FFC0CB | ||
| PinkTint | #FFABBB | ||
| Plum | #DDA0DD | ||
| PowderBlue | #B0E0E6 | ||
| Purple | #800080 | ||
| Red | #FF0000 | ||
| RedOrange | #FF4500 | ||
| RosyBrown | #BC8F8F | ||
| RoyalBlue | #4169E1 | ||
| SaddleBrown | #8B4513 | ||
| Salmon | #FA8072 | ||
| SandyBrown | #F4A460 | ||
| SeaGreen | #2E8B57 | ||
| Seashell | #FFF5EE | ||
| Sienna | #A0522D | ||
| Silver | #C0C0C0 | ||
| SkyBlue | #87CEEB | ||
| SlateBlue | #6A5ACD | ||
| SlateGray | #708090 | ||
| Snow | #FFFAFA | ||
| SpringGreen | #00FF7F | ||
| SteelBlue | #4682B4 | ||
| Tan | #D2B48C | ||
| Teal | #008080 | ||
| Thistle | #D8BFD8 | ||
| Tomato | #FF6347 | ||
| Turquoise | #40E0D0 | ||
| Violet | #EE82EE | ||
| Wheat | #F5DEB3 | ||
| White | #FFFFFF | ||
| WhiteSmoke | #F5F5F5 | ||
| Yellow | #FFFF00 | ||
| YellowGreen | #9ACD32 |
注
上の色名のうち、Aqua と Cyan、Fuchsia と Magenta および Gray と Greyは同じ色を指します。
参考リンク
- HTML Color Names https://www.w3schools.com/tags/ref_colornames.asp
- Colors by Name http://msdn.microsoft.com/en-us/library/aa358802(VS.85).aspx
本ページの記述は、Jmol colors http://jmol.sourceforge.net/jscolors/ にもとづいています。
